Index _ | A | B | C | D | F | G | I | L | M | N | P | R | S | T | U | V _ __call__() (moldrug.utils.GA method) (moldrug.utils.Local method) __init__() (moldrug.utils.Atom method) (moldrug.utils.CHUNK_VINA_OUT method) (moldrug.utils.GA method) (moldrug.utils.Individual method) (moldrug.utils.Local method) (moldrug.utils.VINA_OUT method) __moldrug_version__ (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) _seed_mol (moldrug.utils.GA attribute) A acceptance (moldrug.utils.GA attribute) AddHs (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) Atom (class in moldrug.utils) avg_cost (moldrug.utils.GA attribute) B best_cost (moldrug.utils.GA attribute) beta (moldrug.utils.GA attribute) C checkpoint (moldrug.utils.GA attribute) CHUNK_VINA_OUT (class in moldrug.utils) compressed_pickle() (in module moldrug.utils) confgen() (in module moldrug.utils) cost (moldrug.utils.Individual attribute) Cost() (in module moldrug.fitness) costfunc (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) costfunc_kwargs (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) costfunc_ncores (moldrug.utils.GA attribute) CostMultiReceptors() (in module moldrug.fitness) CostMultiReceptorsOnlyVina() (in module moldrug.fitness) CostOnlyVina() (in module moldrug.fitness) crem_db_path (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) D decompress_pickle() (in module moldrug.utils) deep_update() (in module moldrug.utils) deffnm (moldrug.utils.GA attribute) DerringerSuichDesirability() (in module moldrug.utils) F full_pickle() (in module moldrug.utils) G GA (class in moldrug.utils) get_atoms() (moldrug.utils.CHUNK_VINA_OUT method) get_sim() (in module moldrug.utils) get_similar (moldrug.utils.GA attribute) get_similar_mols() (in module moldrug.utils) grow_crem_kwargs (moldrug.utils.Local attribute) I idx (moldrug.utils.Individual attribute) import_sascorer() (in module moldrug.utils) Individual (class in moldrug.utils) InitIndividual (moldrug.utils.GA attribute) is_iter() (in module moldrug.utils) L LargerTheBest() (in module moldrug.utils) lipinski_filter() (in module moldrug.utils) lipinski_profile() (in module moldrug.utils) Local (class in moldrug.utils) loosen() (in module moldrug.utils) M make_sdf() (in module moldrug.utils) maxiter (moldrug.utils.GA attribute) module moldrug.fitness moldrug.utils mol (moldrug.utils.Individual attribute) moldrug.fitness module moldrug.utils module mutate() (moldrug.utils.GA method) mutate_crem_kwargs (moldrug.utils.GA attribute) N nc (moldrug.utils.GA attribute) NominalTheBest() (in module moldrug.utils) NumCalls (moldrug.utils.GA attribute) NumGens (moldrug.utils.GA attribute) P pdbqt (moldrug.utils.Individual attribute) pickle() (moldrug.utils.GA method) (moldrug.utils.Local method) pop (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) popsize (moldrug.utils.GA attribute) R randomseed (moldrug.utils.GA attribute) (moldrug.utils.Local attribute) roulette_wheel_selection() (in module moldrug.utils) run() (in module moldrug.utils) S save_pop_every_gen (moldrug.utils.GA attribute) SawIndividuals (moldrug.utils.GA attribute) SmallerTheBest() (in module moldrug.utils) smiles (moldrug.utils.Individual attribute) T tar_errors() (in module moldrug.utils) to_dataframe() (in module moldrug.utils) (moldrug.utils.GA method) (moldrug.utils.Local method) TODO (moldrug.utils.GA attribute) U update_reactant_zone() (in module moldrug.utils) V VINA_OUT (class in moldrug.utils)
